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Imported from GitHub PR https://github.com/openxla/xla/pull/35482 Sometime json incorrectly parse compile commands from bazel, and we end up passing them as ``` "-isystem path/to/includes" ``` to `clangd`, and these flags parsed incorrectly Copybara import of the project: -- adf291e21b098d79fa3be4065ee02fafdf5c660a by Eugene Zhulenev <ezhulenev@google.com>: Correctly generate compile_commands.json Merging this change closes #35482 PiperOrigin-RevId: 846269357